YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	SPAC343.15
Protein type:	Globular with Signal Peptide
Type Confidence:	0.68
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLKPLCVVIG TTGAGKSDLA VQLAKRFGSQ VINADSMQIY RGFDTITNKI TVEEQENVHH  60
   61 RLMSFLNFDK EYSVPEFERD ASRVIDEIHS QGKIPIVVGG THYYLQSLLF EDTTLSAIDK 120
  121 LTNDSSPSKP PHPDSHILDD DPSAMLSYLK KIDPVMAEQW HPRDTRKIRR SLEIYFHTGR 180
  181 PPSEIYSEQK MKSSGSKLRY KSLIFWAFAD SLVLMPRLDK RVDKMLSHGL VDEIKSMKSL 240
  241 AESEKFSPDF TRGIWQCIGF KEFMPWFEAP SDIVFNDCLE RMKVSTRQYA KSQKKWIQSR 300
  301 FLPMCLAQQD LSPSSILFST TNTTDLNNWE EQVEKACRVF QYFFYNGDAI APSADDQHAF 360
  361 EKARDYLSIM NGRQSQKKKF VCEECLDKRG DPFTVIGEDA FNVHIKSRKH KTTVRRKKER 420
  421 AERQIRLKNI GILK

Type	Start	End	Confidence
Signal Peptide	1	17	0.66
N-region	1	8
H-region	9	14
C-region	15	17
Cleavage Site	17	18
Non-Cytoplasmic	18	434	0.99