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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: SPAC1B1.04c
Protein type: Globular with Signal Peptide
Type Confidence: 0.75
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MYATLLMLCT NHLAYSSALS SGKNGAAAQQ AANSPKTVSL MTSSSKAANA LQTHKSSLAR  60
   61 AASAVPFSPS KATTVSLKES ASLTSLSNNK SVSNLNSISG ASSPSGSLVN LHSLTRSASF 120
  121 VPQPSVPNSG QLSNADMSRH ILARFPPFFH NLNEQQQKTT SFFLADDHLK WFTYLTQEFY 180
  181 QFANIPKLPS HVLSYHSLIP RRMIVTVLPV LRYATSIYKV IDGNNGLPYS FVQLRDFTLL 240
  241 NDRNITNVSP WTKVDSPHVI KIREAFTTHA FEQKCMLSFI YFENVALYTN LLLAIVFVYN 300
  301 YLPSCPSLYD LFFASPVFRK RTSSFYFSQP LKATKEVLWC FASQLISALY SIHSSGLAAK 360
  361 MVSLKNVLMV GKMRLAIFGL GIMDVIQEES TEPLTSLQRN DCRDVGLILL ALATDTENVT 420
  421 LSTAKAHLTR LKTIVSTDAS LVELIEVLIF NEELRIQTLL PTMLSYMVNN YESVLLMEDV 480
  481 YETYLAEQVE NDRLLRLLLK LEFLDDRPEY VDDPDWSASG VYFVIRLFRK YMFQVQTIDD 540
  541 ASKKPTLQST TTPPRKLLNK AHLLSCLNKL DAGTDEQILL EDEFTRIIMS FKEVRTISIF 600
  601 EKTC

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle