YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	ins1
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.53
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSRKEIYEPR PRYPDGYNGN RAVKKSLSVL SLDNMKSTLS GLFAPLKLDE EQAEDDESLS  60
   61 SYEDYASRQI DDDLKKQRKK GITFIDYSSL ITFFCKLCVI FGLGFVFTYL AEQIVQDAKL 120
  121 PLLTVNLKSW KFEPPWPAIF GFVAVILGLS YRRMDTKYPL GAAPLRPSQS SKWQWISRYL 180
  181 AAFATLLLSM KKLLFISNSH SIVALVASSA SIWYIFDRSR NGIILSTITS VLGSILYYNL 240
  241 VDTSKIELNG VEFPEIQFRL WIPMILFSAS TIVGNAGRLL F

Type	Start	End	Confidence
Cytoplasmic	1	83	0.99
Transmembrane Helix	84	108	0.84
Non-Cytoplasmic	109	134	0.89
Transmembrane Helix	135	154	0.91
Cytoplasmic	155	174	0.95
Transmembrane Helix	175	194	0.69
Non-Cytoplasmic	195	195	0.45
Transmembrane Helix	196	216	0.77
Cytoplasmic	217	221	0.58
Transmembrane Helix	222	241	0.89
Non-Cytoplasmic	242	257	0.60
Transmembrane Helix	258	279	0.88
Cytoplasmic	280	281	0.53