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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: SPAC22H12.05c
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.99
Topology Confidence: 0.91
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNLQFRLYLL FILLFISFAN GKNEYEDKST SIIDLLSSKS QFSKLIRRLQ RNRLVPYLNR  60
   61 NKGLTLFAPL NEAFPDDSIE PNLLYYIVNT TELDRSVLRT QLKSSDGQQI ALKIHYKAET 120
  121 GRAYDKVNNA QIVQSNWRAD SGVVQVIDNI IDLPPPALEI LSSEKDFSIF HRLSVAWVGE 180
  181 YSSVTMLVPD SSAFLNVYTN TELAYLYSMY AAEDVKTLIH QHILVNQRVY AEDVIEPKTF 240
  241 HYKNGISISM KFDKDQKKLF INDVSTTKYD LLTFSGAIHT VSSLINPEII SFTPAKYLIG 300
  301 IGAAWFSEKL SRERKSISVD KTSKRAILAP TNWAYREIID IDYHIIENFD LPAPNKYALY 360
  361 VTNIKSGNSV GEDTNALVRI ATGSAGEMYV NVETRSIQSE NIGNVSLYVL DKDIEPPQPL 420
  421 LSQLILVDEI SFSVRYLASL GLGDYTKVTW FLVKNSAWTQ LGLVHLVLQQ NLELLESVML 480
  481 DYAFEGIAFY GSSDEAWASG NYTTLSNKEF LIEGVYEDSN SRNKRDLLRI NNEIYEVQTR 540
  541 DLLVKDGVVH LVDKVKLPFS VSQKDMIIAG GRKEFLELLD KFEMLDMLDS GYPVVVPSLT 600
  601 GSDVNTKDSS FAERHIIDPE KRNFVISGSR LSVDSSPWIS IQDYGYSELG NVYFVQNAIP 660
  661 TKRQNRWRIT FISISGLLLS VGICVLCYKI YFKFFRNRFM NQGEREPLLA PADSDTMAGR 720
  721 RNSSSLSV

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle