YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	vti1
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.79
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 METYEQEYRL LRADIEEKLN DLSKSGENSV IQSCQRLLNE IDEVIGQMEI EITGIPTSER  60
   61 GLVNGRIRSY RSTLEEWRRH LKEEIGKSDR KALFGNRDET SGDYIASDQD YDQRTRLLQG 120
  121 TNRLEQSSQR LLESQRIANE TEGIGASILR DLHGQRNQLE HSLEMLGDTS GHLDRSLRTL 180
  181 KTMARRLAMN RFFTTAIIAI LVILILLVLY SKFR

Type	Start	End	Confidence
Cytoplasmic	1	187	0.94
Transmembrane Helix	188	210	0.90
Non-Cytoplasmic	211	214	0.79