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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: SPCC70.03c
Protein type: Globular with Signal Peptide
Type Confidence: 0.64
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRAFRLASGV LRNRKVILGI GAGSLITAGN IKIRNDSKFD AFFAKGFPDE LQHRSLFSVL  60
   61 RSAFVYEICS RAWLVKLSLG AMSLCDVFHL SFLYNPFCRY TFYKHFCGGE TPQAVMATMD 120
  121 TLQAAGITSC LNYSREVDLD GDMDVNKIAS QGVVPPQVPV PSEKNQKVLR QIADKAFESN 180
  181 MHIIDMATYK PGTVCAVKLT PFINPLVLQR YNSILNQYPV ESACNYLEHL KSPELSTYEV 240
  241 SELKKFWEYA DKLCQFAKEK QIPLFIDAEQ TYFQDCMHAV TVDLMRKYNK EVAIVHNTYQ 300
  301 LYLKKSRKIM DDHIKKCVAE GWLMGAKLVR GAYLNSEPRF LIHDTKAETD KDFDSAVEAI 360
  361 IAAAAKFAPG DPASASDPIA SRKGKWGIMV ASHNKKTMFE SVNLAETKKV DFTKTSFYLA 420
  421 QLLGMADDIT YALAYSQRNQ QPNFCIVKYV SCGPISEVLP YLVRRARENI DALDRCKEER 480
  481 AYYRQALRRR IF

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle