YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	tif223
Protein type:	Globular with Signal Peptide
Type Confidence:	0.52
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSLYEHAALP LASSPSILGP ISGGRNRGNI QLQSIPIEFQ AVVFAGFGNS LYPLTGSDAL  60
   61 PKALLPIGNK PMLHYPLYWL EAAGFTSAIL ICMEEAEAHI NAWLRSGYEG HMRIHVEAPT 120
  121 ILDDSKSSAD ALRAVSHLIK SQKMLTDTHQ NDFVCLSCDS IVGLPPIYGL DKFRLDNPSA 180
  181 LAVYSPVLKY EHITSQSKEI DAKQLIGIEE KTSRLLYAKS SADVGSDFTF RMSLLWKHPR 240
  241 VTLNTNLSDA HIFVFKHWVI DLIREKESIS SIRGDLIPYL VKCQYQKSFT VRENIQRFLS 300
  301 SPNNIDNYDG GLSSQEIKIN ALIAKDGIIC SRANNLPNYF ELNKCIAKLT PEQRLVDVTV 360
  361 SERALVGADC MVNEGTTIKD NSNIKKSIIG KNCVIGKGVV VSNSILMDNI VVEDGVRLES 420
  421 CIVASGAQIG AKSKLRECEI GVDHRVEAGR IARGERLVDM EKIETDMD

Type	Start	End	Confidence
Signal Peptide	1	23	0.51
N-region	1	14
H-region	15	20
C-region	21	23
Cleavage Site	23	24
Non-Cytoplasmic	24	468	0.97