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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: cnx1
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.94
Topology Confidence: 0.89
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKYGKVSFLA LLCSLYVRGS LADPESEQEP LVFNPTEVKA PLVEQFQGAW SERWIPSHAK  60
   61 RFVNGIEEMS YVGEWTVEES SGPGALKGEA GLVMKDEAAH HAISYEFDEP INEPEKDLVV 120
  121 QYEVNPEEGL NCGGAYLKLL AEPTHGEMSN SIDYRIMFGP DKCGVNDRVH FIFKHKNPLT 180
  181 GEYSEKHLDS RPASLLKPGI TNLYTLIVKP DQTFEVRING DVVRQGSLFY DFIPPVLPPV 240
  241 EIYDPEDIKP ADWVDEPEIP DPNAVKPDDW DEDAPRMIPD PDAVKPEDWL EDEPLYIPDP 300
  301 EAQKPEDWDD EEDGDWIPSE IINPKCIEGA GCGEWKPPMI RNPNYRGPWS PPMIPNPEFI 360
  361 GEWYPRKIPN PDYFDDDHPS HFGPLYGVGF ELWTMQPNIR FSNIYVGHSI EDAERLGNET 420
  421 FLPKLKAERE LLSKQESMEK QSMHVDEESN QILEKFLDVY DIIKAKLPPN VAEKVDYYVE 480
  481 TIIETPEIGI AIVAVLGSLT AVILTCYFYF FASSSPASLS TGTTEAEKEQ QEKFKQETET 540
  541 EKIDVSYAPE TESPTAKNED 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle