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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: NetB-PD, NetB-PC...
Protein type: Globular with Signal Peptide
Type Confidence: 0.95
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVRATGTRMG LLLPIILALA IGSSAAGISS NDPCYFEGKP RKCLPSFVNA AYGNPVQASS  60
   61 VCGAQQPERY CELLRDGNAG ECRSCEQQRY GPAALTDLNN PSNVTCWRSG AVNVPHDPDS 120
  121 APPDNVTLTL SLGKKYELTY ISLSFCPRSP RPDSLAIFKS SDFGQTWQPF QFYSSQCQKF 180
  181 YGRPDRAKIS KFNEQEARCI NSQHDTGGAA QRFAFNTLEG RPSANDLDSS LVLQDWVTAT 240
  241 DIRVVFHRLE LPPQLLKVKN ANAFSDEMGG SREEDEDDDA DLELDGEQDE YDYNLQDNDS 300
  301 ADAGYDEYEE PKKHLELDDD HLHLDYASDG ESVVKRQGKH KGSAYEKHYQ SKLAATTPPQ 360
  361 QPPKVTPPGK VTPPSTAAPS AAASAVTLPI SQHYAVSDFA VGGRCKCNGH ASECVATVSS 420
  421 GSGTALSDQD DGQDEDTPSA PSLANHFGRS TQMSAKLTMT CACKHNTAGP ECERCKPFYF 480
  481 DRPWGRATDN DANECKMCQC NGHARRCRFN LELYKLSGRV SGGVCYNCQH DTTGRYCHYC 540
  541 REGYYRDATK PPNHRKVCKR CDCHPVGSTG KTCNHLSGQC PCKEGVTGLT CNRCARGYQQ 600
  601 TRSHVAPCIK VPTNANMIQA ESAGGGGGGG TGDYKDGGGS QVEEMKKYCG KCKASPKKLN 660
  661 LNKFCMEDYA ILAKVIGHDR ASQDISTEKF SIERQNEIYK YEINIQTIFK RNPMSGTTSS 720
  721 LLGRGNMMLL VPRKSIECQC PKIKLNKSYL ILGRDSEAAP GYLAIGPSSV VLEWKDEWSL 780
  781 RMKRFQRRAR KCS

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle