YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	FBpp0311925, CG1...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNLLLLVATA ASVAALTSGE PSLLSDEFIE VVRSKAKTWT VGRNFDASVT EGHIRRLMGV  60
   61 HPDAHKFALP DKREVLGDLY VNSVDELPEE FDSRKQWPNC PTIGEIRDQG SCGSCWAFGA 120
  121 VEAMSDRVCI HSGGKVNFHF SADDLVSCCH TCGFGCNGGF PGAAWSYWTR KGIVSGGPYG 180
  181 SNQGCRPYEI SPCEHHVNGT RPPCAHGGRT PKCSHVCQSG YTVDYAKDKH FGSKSYSVRR 240
  241 NVREIQEEIM TNGPVEGAFT VYEDLILYKD GVYQHEHGKE LGGHAIRILG WGVWGEEKIP 300
  301 YWLIGNSWNT DWGDHGFFRI LRGQDHCGIE SSISAGLPKL

Type	Start	End	Confidence
Signal Peptide	1	19	0.98
N-region	1	10
H-region	11	16
C-region	17	19
Cleavage Site	19	20
Non-Cytoplasmic	20	340	0.99