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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: Ir11a-PA
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.62
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSRRAESCRD IHNGHSVMRF AILWLFSGCL LPGIQVGIWV VVRAQPTGRD VLLSRLGNQQ  60
   61 NELNTRRLAN ASSYLTRNYI ANRINTLVVR EICVECPYEL SERQRQLVDQ ILASLAPELS 120
  121 VLLHKGTAEE TTWEYTLFVV NDHTAFTGQV FIFPDELLER EFFCIVVVSE IQSRQFVRQT 180
  181 VGSIVKSNLQ MHFVNVVVVA QLEDGTVGTY SYKLFKANCT PGITVRQINH FDRITGKPQQ 240
  241 SMPDLYPVRN GHLGDCPFNV GAAHMPPHLI YKRHKDPPPA SNVSIPAEDL AGIDWDLLQL 300
  301 LAKALKFRIQ LYMPQEPSQI FGEGNVSGCF RQLADGTVSI AIGGLSGSDK RRSLFSKSTV 360
  361 YHQSNFVMVV RRDRYLGRLG PLILPFRGKL WGVIIVILLL AVLSTCWLRS RLGLSHPIED 420
  421 LLTVIVGNPI PDHRLPGKGF LRYLLASWML LTLVLRCAYQ ARLFDVLRLS RHRPLPKDLS 480
  481 GLIKDNYTMV ANGYHDFYPL ELTCRQPLDF SARFERVQRA APDERLTTIA LISNLAYWNH 540
  541 KHPNISRLTF VRQPIYMYHL VIYFPRRFFL RPAIDRKIKQ LLSAGVMAHI ERRYMQYENK 600
  601 RKVASNDPVL LRRITKSIMN GAYRIHGLVI VLATGMFILE LLAGRSNGRL RRWMEWVHQ

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle