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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: FBpp0312045, Ork...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.42
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSPNRWILLL IFYISYLMFG AAIYYHIEHG EEKISRAEQR KAQIAINEYL LEELGDKNTT  60
   61 TQDEILQRIS DYCDKPVTLP PTYDDTPYTW TFYHAFFFAF TVCSTVGYGN ISPTTFAGRM 120
  121 IMIAYSVIGI PVNGILFAGL GEYFGRTFEA IYRRYKKYKM STDMHYVPPQ LGLITTVVIA 180
  181 LIPGIALFLL LPSWVFTYFE NWPYSISLYY SYVTTTTIGF GDYVPTFGAN QPKEFGGWFV 240
  241 VYQIFVIVWF IFSLGYLVMI MTFITRGLQS KKLAYLEQQL SSNLKATQNR IWSGVTKDVG 300
  301 YLRRMLNELY ILKVKPVYTD VDIAYTLPRS NSCPDLSMYR VEPAPIPSRK RAFSVCADMV 360
  361 AAQREAGMVH ANSDTELSKL DREKTFETAE AYRQTTDLLA KVVNALATVK PPPAEQEDAA 420
  421 LYGGYHGFSD SQILASEWSF STVNEFTSPR RPRARACSDF NLEAPRWQSE RPLRSSHNEW 480
  481 TWSGDNQQIQ EAFNQRYKGQ QRANGAANST MVHLEPDALE EQLKKQSPGA GRVKKFSMPD 540
  541 GLRRLFPFQK KRPSQDLERK LSVVSVPEGV ISQQARSPLD YYSNTVTAAS SQSYLRNGRG 600
  601 PPPPFESNGS LASGGGGLTN MGFQMEDGAT PPSALGGGAY QRKAAAGKRR RESIYTQNQA 660
  661 PSARRGSMYP PTAHALAQMQ MRRGSLATSG SGSAAMAAVA ARRGSLFPAT ASASSLTSAP 720
  721 RRSSIFSVTS EKDMNVLEQT TIADLIRALE VVHTHAVLDE QQQAAAAGGA AGGGGISRGS 780
  781 RKQRKMGNAG LEPPQLPPIL SLFAGDQTRT LQAAAANRLY ARRSTIVGIS PTGGAATAPA 840
  841 ARSLLEPPPS YTERAANQSQ ITAGPSNAPT VQSKFRRRFS VRPTALQIPP GQAPPPGASL 900
  901 MEQSSQTALQ RRLSLRPSPL ARELSPTSPP GGSGSALPAG AIDESGGTSA QRLLPLPAGT 960
  961 RPSTSSTHSP LSRIVQISQA QRKSSMPSAA ATGSSGAPAE K

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle