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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: CG34408-PA
Protein type: Globular with Signal Peptide
Type Confidence: 0.49
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MYSEWASLSA QITANSCGAQ CFSVLNKFPA SAGREVVVSV VKQLGTNLGI TQNAEPSHLV  60
   61 KDEEVKWCMD VICFGLSLPL QEHETIKDCV NVYCEWLTAL HPQPRISVPK PICEDANLYA 120
  121 RQIINHFHNL FVPRQGESAD TIKRQAVLCH RVLRTLQQTA QISQLMDRQT WDTLLLFLLA 180
  181 INEILLAPPT VKDDVGDQLC ERVLSVLFEV WLLACVRSFP SPSMWKTLQE SCAMWRHRVA 240
  241 LVDQWNRVNL ALTARLLEFS YGPAFPQLKN ADEDGQLIPI GMSNDCVAQT WYRFLRMIGN 300
  301 PTALCSPHII SKSSHFVQWA LTHEKGAETH QHPCLQQLPQ IFLNAMKGIS SQVDAFLGLS 360
  361 KTSLIGLTGG GARNAISSSS TTTTNAGSTG GTGSGDGSAP APLPTTPTST SGPPSASSSI 420
  421 NSLPLTSMGA GVELAVARPK CNSILHVFHE WLFEAAHIGG DTWRQNRKKQ ACEASKRPSS 480
  481 MIMEHRKGSI SLSQPNSLND PQSLPPTLTI DKYESGRAEA IGTLCKIFCA KKTGEEILPV 540
  541 YLARFYMALQ QCLKITESRE CDETLASILL HSSDLFRLDL DGINVLLPGF IAALEIVLPD 600
  601 KDLKLKTQSM VFNRTELRRS AINILLSIMV LPLHYQTLPI RDLTCESSEK MFTFIQLKSR 660
  661 LMNILMNALQ VETDAQNTHM LLGGLLLCVQ DAVTFEETEL GGGNANLSQN SSGVQHHDAN 720
  721 LLSSACSERS ASLVSAGTAS LGGQTTATMG AGSGSIRDTA SAHDYPSLTI SDDMSFEFGQ 780
  781 ELEGVTTYDN AHALFVRATY LVCHRLISSW KTDLNVSLAA LELLSGLARL HIRETDALEC 840
  841 KRAVKWICDY ICYQCSRPPP AHSKDLHSTI VAAFQCTAAW LMQHPYLLQD KDCLQTVLEV 900
  901 VELGISGTKS QSKGTDIPKF KDEKELKPAS MRVRDAAENL LTIILEQVGY FPSECGPESI 960
  961 SSLLDELALM KHCNSMVPAA AASSEQAIAK FKYFVTENST ILALLEEPLG NDQDPQPTVT1020
 1021 LLIRGPFGRH AWTMQLRHLP RSKSGIKYHA INPGRPIPMN DVTQRLDSEQ KNFPDGVDKV1080
 1081 QPCVADYSIP TIEQMREQYG TAVIRELESL LENQSIHEKL AWAEADTSAD SLSHAQECVP1140
 1141 PTVCHEFHAA RLFLSHFGFL GFETRNPQNP AEALGNPPQR PLIVLDTKSA AFAADLDRLD1200
 1201 KLSARTHDSV YVFYVKSGQT SAQQIIANMG EESSASHDPH FASMLQTLGW PVQVSEHSGW1260
 1261 TGFAHNSWSL KGTPEEQLKS TANELNYNGS QRVLYWADVS SEIAFVVPTT WNLRYNSDTC1320
 1321 DSGSISSTDQ IGSSNVWTRG EADSAAGLAK SKSRNLSLEL DTNRRDVKEP VPPTRRKGNV1380
 1381 TKPTLLAQAP AKIFLVWLES YEDYLNFPLE DLLAYTRTGE ELQTQQLPRA SDCHVIFVHS1440
 1441 LLSGLLRVKL QGPPGRMSFA TPLVDGMVLS RRVVGNLVRQ TALNISRRRR LDNDNYQPPH1500
 1501 VRRRLKVQDI VQKYKMDLSE ADLLAHLFQR AI

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Created and Maintained by: Michael Riffle