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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: yu-PA, FBpp03008...
Protein type: Transmembrane
Type Confidence: 0.67
Topology Confidence: 0.47
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVSGRPLLYL SLPGVAFILG VFWFRRRYKN CLDKPDDEDS SAINDSSIEP TVQARKANGV  60
   61 LQNGKLPQQS ASKSMNINGT LVNGSGSGSG SSSDEKDSPT TMLYGKSAPI KIQSNGRTSN 120
  121 GKHQQQIDSE ILKSKIQDAE HKTLCSIDED FENLSSPRDL PDSVNTRVSF YNRKATQKTV 180
  181 EPVVIKATRT PKISPENSFL DTNYTNKECE QNNNCEPKEE PSKKEADQEE LEQDQEQTVL 240
  241 KEEVVDSNGN QKRNVDAASP SLSICSVQSG DSGKGSSLPR SEATRVKTTY EFLFPISLIG 300
  301 HLYGRKRAFI NQIKAKTLAS VSVGKNPYSG KVRICTIEGT ESEIDAALAM IRQRLPAKRY 360
  361 PNFTMQRIHF ALPQTIVPLS TESLYNLQLK LIEGINNDVV VSAVLSGSHI FIQHPLHPSH 420
  421 PSLPLLQKQL YDSYSTMEAP LLPSLELSAV CVIPINDVWY RVQIVDTDPE DEERCVIKFL 480
  481 DFGGYMNVGF NTLRQIRTDF MNVPFQSTEC ILSNIEPIGG TWSIEAAEIL NKLTKGIVLQ 540
  541 AQVAGYNSHN LPEIFLFASL GPNNVIFINK ELVGRKLAKW VEMSD

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle