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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: dnc-PM
Protein type: Globular with Signal Peptide
Type Confidence: 0.94
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPPPRRRRTA VAASAAAAAA ATTTTTTTTA TRAATTTPVT TAPTPTAITT TYRSRNLLKA  60
   61 TAKVKKKKKW KQISFVDDQQ RLKQAATSAE RKRSTSSAPP ALESNVPPRL GRFLRQKSSE 120
  121 TNSAATSAAA AAVQTEAETG RRKSSAASII AAAAGAAGLH NNNSSSCAAT ASEEQNSSGT 180
  181 LTGSSGNTST STWCGSINFL VYMVCSFCCC CYNFRNSPFD VENGQGARSP LEGGSPSAGL 240
  241 VLQNLPQRRE SFLYRSDSDF EMSPKSMSRN SSIASERFKE QEASILVDRS HGEDLIVTPF 300
  301 AQILASLRSV RNNLLSLTNV PASNKSRRPN QSSSASRSGN PPGAPLSQGE EAYTRLATDT 360
  361 IEELDWCLDQ LETIQTHRSV SDMASLKFKR MLNKELSHFS ESSRSGNQIS EYICSTFLDK 420
  421 QQEFDLPSLR VEDNPELVAA NAAAGQQSAG QYARSRSPRG PPMSQISGVK RPLSHTNSFT 480
  481 GERLPTFGVE TPRENELGTL LGELDTWGIQ IFSIGEFSVN RPLTCVAYTI FQSRELLTSL 540
  541 MIPPKTFLNF MSTLEDHYVK DNPFHNSLHA ADVTQSTNVL LNTPALEGVF TPLEVGGALF 600
  601 AACIHDVDHP GLTNQFLVNS SSELALMYND ESVLENHHLA VAFKLLQNQG CDIFCNMQKK 660
  661 QRQTLRKMVI DIVLSTDMSK HMSLLADLKT MVETKKVAGS GVLLLDNYTD RIQVLENLVH 720
  721 CADLSNPTKP LPLYKRWVAL LMEEFFLQGD KERESGMDIS PMCDRHNATI EKSQVGFIDY 780
  781 IVHPLWETWA DLVHPDAQDI LDTLEENRDY YQSMIPPSPP PSGVDENPQE DRIRFQVTLE 840
  841 ESDQENLAEL EEGDESGGES TTTGTTGTTA ASALSGAGGG GGGGGGMAPR TGGCQNQPQH 900
  901 GGM

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle