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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: FBpp0310320, rst-PA
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.98
Topology Confidence: 0.92
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLHTMQLLLL ATIVGMVRSS PYTSYQNQRF AMEPQDQTAV VGARVTLPCR VINKQGTLQW  60
   61 TKDDFGLGTS RDLSGFERYA MVGSDEEGDY SLDIYPVMLD DDARYQCQVS PGPEGQPAIR 120
  121 STFAGLTVLV PPEAPKITQG DVIYATEDRK VEIECVSVGG KPAAEITWID GLGNVLTDNI 180
  181 EYTVIPLPDQ RRFTAKSVLR LTPKKEHHNT NFSCQAQNTA DRTYRSAKIR VEVKYAPKVK 240
  241 VNVMGSLPGG AGGSVGGAGG GSVHMSTGSR IVEHSQVRLE CRADANPSDV RYRWFINDEP 300
  301 IIGGQKTEMV IRNVTRKFHD AIVKCEVQNS VGKSEDSETL DISYAPSFRQ RPQSMEADVG 360
  361 SVVSLTCEVD SNPQPEIVWI QHPSDRVVGT STNLTFSVSN ETAGRYYCKA NVPGYAEISA 420
  421 DAYVYLKGSP AIGSQRTQYG LVGDTARIEC FASSVPRARH VSWTFNGQEI SSESGHDYSI 480
  481 LVDAVPGGVK STLIIRDSQA YHYGKYNCTV VNDYGNDVAE IQLQAKKSVS LLMTIVGGIS 540
  541 VVAFLLVLTI LVVVYIKCKK RTKLPPADVI SEHQITKNGG VSCKLEPGDR TSNYSDLKVD 600
  601 ISGGYVPYGD YSTHYSPPPQ YLTTCSTKSN GSSTIMQNNH QNQLQLQQQQ QQSHHQHHTQ 660
  661 TTTLPMTFLT NSSGGSLTGS IIGSREIRQD NGLPSLQSTT ASVVSSSPNG SCSNQSTTAA 720
  721 TTTTTHVVVP SSMALSVDPR YSAIYGNPYL RSSNSSLLPP PTAV

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle