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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: Actbeta-PA
Protein type: Transmembrane
Type Confidence: 0.82
Topology Confidence: 0.70
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRFAFDSNHS QSGAPFKGSR CFFNCQCICC RQGCCVVVVK CCCCFNLNCC NSLGSRKSFP  60
   61 QPAAMRKKVA DLEVLRVSRF VAVILVLARW VTAVATLLTS CILLDIFSVP GQSGVADRSQ 120
  121 ASSRTVHVSV PTTPNETPSS TSETKLKLLY GYTSYDINND QQVKSNNLCR VLCKSRNRKR 180
  181 QRRRRRRRNH RRRRHRYTKR LHHLMQDNMS GFEQRLNFSD AKCQSLETNY GTNYDLVQGG 240
  241 KLFSQSERSL LVSPLREIEA PWPAIHGSMR NCSKIKRNRA NLIWLLIGLV WFEVKLINCN 300
  301 GISSSNYYAS NLESHKGCTL CHESGKPNIY TDKDNPHTDY NIYNKYHSNN NFNKKTNQPH 360
  361 NNIAPSDEVR LESIKRQILT KLGLSHKPNV SHPLPKQFIW ETIYRVDGGR MIPNNAFGSS 420
  421 GKNLDQKTIK LRAFASPGSH LFNGRGGRTD QRSERDPSHH KYRSPFDFTF NISKNNVYGK 480
  481 VLRNRSLERI DKKNSFLNGW TENRQLKINS QIASMPIELK SHHNSSPKEL KSGAVRKVNG 540
  541 INGTQMNENA LKKSTYPIDI NHSIDNKTHT GKNGEMSHND YEYFNDYSVQ THDKNRYHEG 600
  601 RSSIGYQPAI HNIEYENQKG HHESFADDHE NIDHEDFFGN TQEIITFAEE GTQYRQYRIL 660
  661 EFSAQNRRVP SQKLSIRSAQ IHIRIDKPHS LWIEKAKSLP EKHLLNTKRK WGANKPHHRI 720
  721 KIWVFQLSTS INITEKGIDK AIIFRASFQV DPKNLGWQKF DLTDTIREWY GHTSHEKLRL 780
  781 LIDCTGCGGR YSLHLFQTSK LRGNSSDYLS TNPNRPFLVL HTESSRTRRV RRRAVDCGGA 840
  841 LNGQCCKESF YVSFKALGWD DWIIAPRGYF ANYCRGDCTG SFRTPDTFQT FHAHFIEEYR 900
  901 KMGLMNGMRP CCAPIKFSSM SLIYYGDDGI IKRDLPKMVV DECGCP

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle