YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	FBpp0305832, CG1...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.80
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MANIMRRTLI PGLSHLRLRP QLVAAGSAAL TSQETRRGAA KWYPDPEFMK QFSGPVMYPD  60
   61 EVTSLWTVPP WNSKVTPVEK SVRNLTLNFG PQHPAAHGVL RLVLELDGET VMRADPHIGL 120
  121 LHRGTEKLIE YKTYTQALPY FDRLDYVSMM CNEQCYSLAV EKLLNIDVPL RAKYIRTLFA 180
  181 EITRILNHIM AVGTHALDVG ALTPFFWLFE EREKMMEFYE RVSGARMHAA YIRPGGVSLD 240
  241 MPLGLMDDIY EFASKFAERL DEVEDVLTTN RIWVQRTEDI GIVTAEEALN YGFSGVMLRG 300
  301 SGIKWDLRKQ QPYDAYNLVN FDVPIGTKGD CYDRYLCRVE EMRQSLRIID QCLNQMPAGE 360
  361 IKTDDAKVAP PSRSEMKTSM EALIHHFKLF TQGYQVPPGA TYTAIEAPKG EFGVYLISDG 420
  421 SSRPYRCKIK APGFAHLAAL EKIGKQHMLA DVVAIIGTLD VVFGEIDR

Type	Start	End	Confidence
Signal Peptide	1	38	0.80
N-region	1	29
H-region	30	35
C-region	36	38
Cleavage Site	38	39
Non-Cytoplasmic	39	468	0.96