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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|24650134, gi|...
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.99
Topology Confidence: 0.94
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGRIWCLLFV SSLLHTQSQS FRVLAINEAT CSSDQFRCGN GNCIPNKWRC DQESDCADGS  60
   61 DEANELCRAR TCSPDEYACK SGEGQCVPLA WMCDQSKDCS DGSDEHNCNQ TCRADEFTCG 120
  121 NGRCIQKRWK CDHDDDCGDG SDEKECPVVP CDSVAEHTCT NGACIAKRWV CDGDPDCSDG 180
  181 SDERSCANVT KTTTPCLSHE YQCKDRITCL HHSWLCDGDR DCPDGDDEHT ANCKNVTCRA 240
  241 DQFQCGDRSC IPGHLTCNGD KDCADGSDER DCGLSLSLGI NQGGCNATSE FDCGGGQCVP 300
  301 LSKVCDKRKD CPDGEDEPAG KCGINECASK NGGCMHQCID LKVGHHCECH EGYKLSPDKR 360
  361 NCQDINECEV PGKCSQICVN EIGGFKCECE AGYMRDPKNH TRCKASEGHA SLLLARRHDI 420
  421 RKIALDHMEM TSIVNSTKAA TALDFVFRTG MIFWSDVTTQ SIYKAPIDEG NEKTVVLTKS 480
  481 SVTSDGLAVD WIYNHVYFTD THKCTIELTN FEGSMGKVLV KDSLDIPRSI ALDPIEGWMY 540
  541 WSDWGASPRI ERAGMDGSHR TTIISYDVKW PNGITLDLVK KRIYWVDGKL NVISSANYDG 600
  601 SQRSQVLYSG EYLRHPFSIT TFEDNVYWTD WDKQAVFKAN KFTGEDVEPV TAMHMLQHPM 660
  661 VVHVYHPYRQ PDGVNHCQSV NGHCSHLCLP APRINERSPR ISCACPTGLK LMVDGLMCVE 720
  721 DLTRPPRARK TKPRPKSPRR RLPTGVQVGH ADIRIEINDD LQLSTRLPLL PTTFVADQRP 780
  781 VKNHTQIEKT TTPSEQPDSG FIALVVIASL SGFAVLLSVL LLIGYRYCSK RRINSMNFEN 840
  841 PIYRKTTTTE DHFSLRKNLP ARIYDHTSVM DEEYSPVIGI SSY

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle