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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: Miro-PD
Protein type: Transmembrane
Type Confidence: 0.86
Topology Confidence: 0.71
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGQYTASQRK NVRILLVGDA GVGKTSLILS LVSEEYPEEV PPRAEEITIP ANVTPEQVPT  60
   61 SIVDFSAVEQ SEDALAAEIN KAHVVCIVYA VDDDDTLDRI TSHWLPLVRA KCNPSLDGEG 120
  121 DAEAEAEGDT QREPIRKPIV LVGNKIDLIE YSTMDSVLAI MEDYPEIESC VECSAKSLHN 180
  181 ISEMFYYAQK AVLHPTSPLY MMEEQELTSA CKKSLVRIFK ICDIDGDNLL NDYELNLFQR 240
  241 RCFNTPLQPQ ILDEVKAVIQ KNVPDGIYND AVTLKGFLFL HCLFIQRGRN ETTWAVLRRF 300
  301 GYNDQLEMCQ EYLRPPLKIP PGSSTELSHR GQQFLIAVFE RYDRDGDGAL SPEEHKMLFS 360
  361 TCPAAPWSYS TDIRKSCPIN ETTGWVTLHG WLCRWTLMTL IDVVKTMEYL AYLGFNVHEN 420
  421 DSQLAAIHVT RERRIDLAKR QSSRSVYKCH VIGPKGSGKT GMCRGFLVED MHKLIGKEFK 480
  481 TNVVNCINSV QVYGQEKHLI LRDIDVRHAL DPLQPQEVNC DVACLVYDSS NPRSFEYVAR 540
  541 IYIKYYAESK IPVMIVGTKC DMDERRQDYL MQPSEFCDKY KLLPPHLFSL KTNKKELYTK 600
  601 LATMAAFPHL RQFGLMTEDP KLWLKAGLGV AAATMLGFIV LKTISAAGAH TR

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle