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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: cenB1A-PB
Protein type: Transmembrane
Type Confidence: 0.64
Topology Confidence: 0.43
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQNRHMSVNR YCDSNTNSTS NKIEGYLFKK KSKGFKTWCR RWFYLSDNQL VYSDLDSHCR  60
   61 KRSNEDSFSV MEEDLRICSV RPVNEGDRRF CFEVISPTKS HILQADSADM LSLWISALQH 120
  121 SIGAAIQHDS THHSRPQSTN APNNSLPAKR RIHWEEFLKI PGNAYCCDCR SPEPRWASIN 180
  181 LGITLCIECS GVHRSLGVHY SKVRSLTLDA WESENVKVMM ELGNEVVNRI YEARIGDDCG 240
  241 LKKPTEQCEI GVREAWIKAK YVERRFVCGM PKPQELLASE TAEVLSIDSG GVVEDGESGG 300
  301 SGIAKRATLS LGGTRKWAVK KLRRRQKQRS IPKTLSDDPS IYNTAKTGDE LEDDDDDESI 360
  361 NIPSMSLSIS RDDLLVIGDD LALDRLETPG ILGSDQESTD GESDAESPEE LPFSQLDANQ 420
  421 LLYMASVVHN LPVMCMAFAL GADKMWKNPQ DRQRSFLHQA VISGSVMACE FLLLNGAAID 480
  481 AVDEMGYSAL HISTAKGHIA QVYLLLKHKA AYDLSSSDGK KALDIAVDQE NADIVTLLRL 540
  541 TQLNDEIGPN DEYNGEDETY KNVMKDFSKL PASQTRVLRQ RHDSNTLESQ RSSLTNSD

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle