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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: loco-PD
Protein type: Globular with Signal Peptide
Type Confidence: 0.94
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MHHHHPPLPI TGASGSTAVG TGAAAAEDAS PAANSGPAPI STSTTPSGSN SQQHQRRRKK  60
   61 RANYNYNGIR TVEVRRGYNG FGFTISGQQP CRLSCIISSS PAEQAGLRSG DFLISVNGLN 120
  121 VSKLPHETVV QLIGNSFGSI RMQIAENYYS DSSDEENAHA TLRGQLLAAS LRHKPRFLHH 180
  181 KAKLHRLRNS PQKKLNPPEA VEPHKSKSSP DHPTLKPVLE DPPLTANLSK AADVANVSAM 240
  241 VRAVGSAALE CRVIVGYLGT IEMPKQISHS SKLQTVRSCI RKLRQEKRQP TIVLMCITPD 300
  301 SLSLQSSSGG VLATYSSARL NFVSSSSESE NRFFGLVTSA VHNTQIEEEY EPSAGSAAAA 360
  361 GHISISHSCH VFVIDTKLIE HAQHLQRAHE FRLQCTRDPI SNLCLEFPNN SEYVVNLVRS 420
  421 MYTMRILPPA SRSHQADYEA GAGAAAAGGA VAAAHSPQPS NHSEISTTTS NSDSGIGFNN 480
  481 DCTNISDRIL VVDFLAAGAG AAAAAHAGPP TYPAPARPLG IVGIPDNRLT VRAMPDHSAL 540
  541 LRSPPASSSL RRPNLLASFN LIQSPATNLT STRSCDDVLN LFVDDSPRTL AAVASMDDIS 600
  601 LHSAAPSLDE GHTFAHPACV PRKMRRSLAL ETPTTPHKLS AQVFGQPGSR HSLGFEAIDS 660
  661 VQSSVSGACM DQTMDTWASL QNLHKSHKDR TSMSASSSSH CLLEATNSEP DLGNRALPAN 720
  721 ASPFRRAWGQ SSFRTPRSDK VAKEQQQLGQ SSPVRRTASM NASDNDMYIK TLMLDSDLKS 780
  781 SRSQHQLSLL QVPKVLTTPA PPSAITASVA AEGAAQDHGC PSSWAGSFER MLQDAAGMQT 840
  841 FSEFLKKEFS AENIYFWTAC ERYRLLESEA DRVAQAREIF AKHLANNSSD PVNVDSQARS 900
  901 LTEEKLADAA PDIFAPAQKQ IFSLMKFDSY QRFIRSDLYK SCVEAEQKNQ PLPYSGLDLD 960
  961 ELLKTNFHLG AFSKLKKSAS NAEDRRRKSL LPWHRKTRSK SRDRTEIMAD MQHALMPAPP1020
 1021 VPQNAPLTSA SLKLVCGQNS LSDLHSSRSS LSSFDAGTAT GGQGASTESV YSLCRVILTD1080
 1081 GATTIVQTRP GETVGELVER LLEKRNLVYP YYDIVFQGST KSIDVQQPSQ ILAGKEVVIE1140
 1141 RRVAFKLDLP DPKVISVKSK PKKQLHEVIR PILSKYNYKM EQVQVIMRDT QVPIDLNQPV1200
 1201 TMADGQRLRI VMVNSDFQVG GGSSMPPKQS KPMKPLPQGH LDELTNKVFN ELLASKADAA1260
 1261 ASEKSRPVDL CSMKSNEAPS ETSSLFERMR RQQRDGGNIP ASKLPKLKKK STSSSQQSEE1320
 1321 AATTQAVADP KKPIIAKLKA GVKLQVTERV AEHQDELLEG LKRAQLARLE DQRGTEINFD1380
 1381 LPDFLKNKEN LSAAVSKLRK VRASLSPVSK VPATPTEIPQ PAPRLSITRS QQPVSPMKVD1440
 1441 QEPETDLPAA TQDQTEFAKA PPPLPPKPKV LPIKPSNWGV AQPTGNYCNK YSPSKQVPTS1500
 1501 PKEASKPGTF ASKIPLDLGR KSLEEAGSRC AYLDEPSSSF V

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