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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: GABA-B-R2-PB
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.99
Topology Confidence: 0.79
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFRPSWFPFA SLLFLLLWST ACGRTAKRSD VYIAGFFPYG DGVENSYTGR GVMPSVKLAL  60
   61 GHVNEHGKIL ANYRLHMWWN DTQCNAAVGV KSFFDMMHSG PNKVMLFGAA CTHVTDPIAK 120
  121 ASKHWHLTQL SYADTHPMFT KDAFPNFFRV VPSENAFNAP RLALLKEFNW TRVGTVYQNE 180
  181 PRYSLPHNHM VADLDAMEVE VVETQSFVND VAESLKKLRE KDVRIILGNF NEHFARKAFC 240
  241 EAYKLDMYGR AYQWLIMATY STDWWNVTQD SECSVEEIAT ALEGAILVDL LPLSTSGDIT 300
  301 VAGITADEYL VEYDRLRGTE YSRFHGYTYD GIWAAALAIQ YVAEKREDLL THFDYRVKDW 360
  361 ESVFLEALRN TSFEGVTGPV RFYNNERKAN ILINQFQLGQ MEKIGEYHSQ KSHLDLSLGK 420
  421 PVKWVGKTPP KDRTLIYIEH SQVNPTIYIV SASASVIGVI IATVFLAFNI KYRNQRYIKM 480
  481 SSPHLNNLII VGCMMTYLSI IFLGLDTTLS SVAAFPYICT ARAWILMAGF SLSFGAMFSK 540
  541 TWRVHSIFTD LKLNKKVIKD YQLFMVVGVL LAIDIAIITT WQIADPFYRE TKQLEPLHHE 600
  601 NIDDVLVIPE NEYCQSEHMT IFVSIIYAYK GLLLVFGAFL AWETRHVSIP ALNDSKHIGF 660
  661 SVYNVFITCL AGAAISLVLS DRKDLVFVLL SFFIIFCTTA TLCLVFVPKL VELKRNPQGV 720
  721 VDKRVRATLR PMSKNGRRDS SVCELEQRLR DVKNTNCRFR KALMEKENEL QALIRKLGPE 780
  781 ARKWIDGVTC TGGSNVGSEL EPILNDDIVR LSAPPVRREM PSTTEVTEMT SVDSVTSTHV 840
  841 EMDNSFVSVQ STVMAPSLPP KKKKQSIVEH HSHAPAPTMM QPIQQQLQQH LQQHQQMQQQ 900
  901 HLQQQQHQQM QQQQQQQQHH HRHLEKRNSV SAQTDDNIGS ITSTAGKRSG GDCSSMRERR 960
  961 QSTASRHYDS GSQTPTARPK YSSSHRNSST NISTSQSELS NMCPHSKPST PAVIKTPTAS1020
 1021 DHRRTSMGSA LKSNFVVSQS DLWDTHTLSH AKQRQSPRNY ASPQRCAEHH GGHGMTYDPN1080
 1081 TTSPIQRSVS EKNRNKHRPK PQKGTVCQSE TDSERERDPP PNSQPCVQPR KVSRSSNIQH1140
 1141 AAHHHSSPNV APDKQRSRQR GKQDSSIYGA SSETELLEGE TAILPIFRKL LTEKSPNYRG1200
 1201 RSAVGQSCPN ISIKCDIVEY L

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle