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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: CG42668-PD
Protein type: Transmembrane
Type Confidence: 0.96
Topology Confidence: 0.89
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVYPSAKYPL QYSAFVPVRQ AGNYTLIFAR FRLLKKYLDA DSQNEAPNAV MSGLESESES  60
   61 DPAEPAQDDV VDQQCVETSY VPFTEEEFGE QGEQVEELAE ENKSLIWCIV KQVRPGMDLS 120
  121 KVVLPTFILE PRSFLDKLSD SYYHADLLSK AVQEDDAFTR MKLVVQWYLS SFYKKPKGLK 180
  181 KPYNPILGER FRCYWQHPSG SRTFYIAEQV SHHPPVSAFY VTNREDGFSI TCSILAKSKF 240
  241 YGNSTSAVLE GAATMTLLPR GECYTATTPY AHCKGILMGT LSMELGGKIN IECENTGYRT 300
  301 ELEFKLKPFL GGADATNVVV GKIKLGKETL ATINGHWDKE CRVKDSKTGE ETVLFKVDAE 360
  361 TRSKRLTRYM VPLDLQEANE SQRLWQRVSE AIANEDQVAA TEEKTVLEER QRADAKERLS 420
  421 SDSVHMPDLF ELDSYGQWLY KYADLRPWDS RNDVRQYECQ FKVLTQTRHK SVPIVHGAEM 480
  481 IHPLRSSIET LSRTQRQSPA GQPLPPGGSA VPKAKNKSLV LAPRDTNSDS SQSPQGAVKR 540
  541 SSSSAIKQLA LAVDQVNRVL EQHTRQLNEI SQRLERMQYS PPPSSMSAHS LHMLGGGVSQ 600
  601 STVIKSLIYA LIGLAFSLIL RWLFK

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle