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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: SF1-PA
Protein type: Globular with Signal Peptide
Type Confidence: 0.95
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSATPPDLLS LAASREVSAA VAVAASANGG SGRSADKERS RSRDRGRDKD KDRDKDRKKR  60
   61 DKDSRDRDSR RRDDRGDRDR DRERDRDSRS HRSKSRNYDD GDRRRKRSRS RDRDRDRKRD 120
  121 RDRDSRSRRS SSRGGRDDYD RSRRRRSRSR SYERRRNDRG SQRDQRDQHS QRSSRERTHV 180
  181 NPFDTSNSRN SLNQDHDQSR IPSLFDRQQG LETIREEGRE QRFDLTQTIQ ELMGNAGGNK 240
  241 GFASFFNSQN SNDSTSNGAF DNSADSAAER KRKRKSRWGG SENDKTFIPG MPTILPSTLD 300
  301 PAQQEAYLVQ FQIEEISRKL RTGDLGITQN PEERSPSPEP IYSSDGKRLN TREFRYRKRL 360
  361 EEQRHQLIVK MQTVNPEFKP PADYKPPVTR VSDKVLIPQE QHPDINFVGL LIGPRGNTLK 420
  421 AMEKDTGAKI IIRGKGSVKE GKVGRKDGQP LPGEDEPLHA FITAPNPEAV RKAVDKIKDV 480
  481 IRQGIEVPEG HNDLRRMQLR ELAQLNGTLR ENDIQRCTCG STDHKSWQCP DKPIITNTIV 540
  541 CTSCGGTGHL TKDCRNKRPG SGVPGMACED SQAKIDEEYM SLMAELGEGP PPPSASAKTD 600
  601 PPASNGPQLH RASYSIFDKK PSQMQAIQSP PSSSSRDHQR DLGGWGAAAH EHGMGMEHGM 660
  661 GLDQHGHGLA AMDHGMSLGM EHAMAAYVPA PPGTQAPPPM PPPLMPWMSA PQPPPPATEP 720
  721 LNPPIPGTLP PLIPPPPGTS APPMPPWGGG AYSGWGGGYA PPPPPPCAPP PPALSLSQPP 780
  781 PPPPPSA

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle