YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	FBpp0302818, CG5...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.57
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSSSSTSGGR KQPTAVSRMK QDYMRLKRDP LPYITAEPLP NNILEWHYCV KGPEDSPYYG  60
   61 GYYHGTLLFP REFPFKPPSI YMLTPNGRFK TNTRLCLSIS DFHPDTWNPT WCVGTILTGL 120
  121 LSFMLESTPT LGSIESSNYD KQMFAQKSLA FNLRNTNFCE LFPEIVEEIK QRLRGTQAAA 180
  181 AVDGPAANGV KRSNGLANGA SLASADGNLA VGGLANPLNA ADAIDGGAAG QADLASGGGA 240
  241 AVQNSARNSY LNWQSVYSNL VIIICFAIFA LIVNYVIKNL NQE

Type	Start	End	Confidence
Non-Cytoplasmic	1	255	0.57
Transmembrane Helix	256	277	0.91
Cytoplasmic	278	283	0.58