YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: yrt-PA
Protein type: Transmembrane
Type Confidence: 0.88
Topology Confidence: 0.85
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLRFLSRRKV RNNYVDNSRE GGGATSSAVG VAGGGGAITS GGSSQIKPQR IVVNKNKIDC  60
   61 RVILLDNTDL SIELSKKALG SFLYEQVFYA LDIIEKDYFG LQFMDANHVK HWLDPTKPIK 120
  121 KQVKIGPPYT FRLKVKFYSS EPNTLREELT RYLFFLQLKQ DLLEGRLDCP EDKATELCAL 180
  181 ALQSELGDYD NQEHSAATVS EFRFVPEQTE DLEIAILDEY KTCRGLTPAQ AETAFLNKAK 240
  241 WLDMYGVDMH TVLGKDGCEY HLGLTPTGIL VFERDQKIGL FFWPKISKLD FKKKKLTLIV 300
  301 IEDDDEGREQ EHTFVFRLYN EKACKHLWKC AVEHHTFFRL RAPVKGPSAR QNFFRMGSRF 360
  361 RYSGRTEFQT TQQSRARRTV QFERRPSQRF ASRQSHLLRE RQKASQEAAV SAVASVNARA 420
  421 AAAAAAAAAS QSPAPATPLV SSQVSTPTPN NDNNNDAFDS LISTDQFITV TPSPSVLTVI 480
  481 QNSAIIEPDA ACSGSISSSS QAAANFASLG RNSLKSNFSN EDPAYSKIGS IGKASGLTVK 540
  541 LDPDYTPPYS PNATKNFDET NPFRNATSSH HGSFGKASIS SGQLSVKSGL SDKDRELDSL 600
  601 LKSIVKDPSP SVLANEAIND ANSIRVTINK TFDMDHNTET LKRLSNANEK PNNQVKLANV 660
  661 NTTALPPGNI KCNILKARVE EELGAGGNAK LTNQMFVPAA HSSNMHTSNT NSSNNHAHSD 720
  721 GPDSLNATYI SVGGDKLTLS IPEQKPSTGS SSSSSTSSTA TTTTNGNGPY SNATFVSGFS 780
  781 APLTPPSSLP ANLNNTGSGC NTTLTSVTTI STPSSPTATV STTASESVAP ALSNASAAEI 840
  841 LINEIFINNI INNNASGSIT AETAAKPAGS STPSAGTLLF STLSEQERLE SQKTNQQMNQ 900
  901 SLNLNQNHSE VDAPPSEKKT PSNYPDSSRI PFPSSSNSKD MVSPWLVSSE VVSAPKGRES 960
  961 AIIRKSVITT QL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle