YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: snk-PB, snk-PA
Protein type: Globular with Signal Peptide
Type Confidence: 0.72
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIILWSLIVH LQLTCLHLIL QTPNLEALDA LEIINYQTTK YTIPEVWKEQ PVATIGEDVD  60
   61 DQDTEDEESY LKFGDDAEVR TSVSEGLHEG AFCRRSFDGR SGYCILAYQC LHVIREYRVH 120
  121 GTRIDICTHR NNVPVICCPL ADKHVLAQRI SATKCQEYNA AARRLHLTDT GRTFSGKQCV 180
  181 PSVPLIVGGT PTRHGLFPHM AALGWTQGSG SKDQDIKWGC GGALVSELYV LTAAHCATSG 240
  241 SKPPDMVRLG ARQLNETSAT QQDIKILIIV LHPKYRSSAY YHDIALLKLT RRVKFSEQVR 300
  301 PACLWQLPEL QIPTVVAAGW GRTEFLGAKS NALRQVDLDV VPQMTCKQIY RKERRLPRGI 360
  361 IEGQFCAGYL PGGRDTCQGD SGGPIHALLP EYNCVAFVVG ITSFGKFCAA PNAPGVYTRL 420
  421 YSYLDWIEKI AFKQH

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle