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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: CG6225-PB, CG6225-PA
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.88
Topology Confidence: 0.73
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTTAKWIWRL ALSILLVVGF VAAEKPTGYH REICQYRKGK HIQPMSVYHN RLMAMREQMQ  60
   61 IRATLQGPEI YGYILPSTDE HLNQEVAARD QRLRYLSGFS GVRAFAAVTS HGAAIWVENR 120
  121 YAQQADGELE CDWEIYLTSG NVSVADWLGS HVHIDKRVGA DPHLVPHSLW VQWERELEDK 180
  181 FLKLVRINTN LVDHIWGDER PEMPKNQVIK VHEKHFAGES WQDKVKELRR RLAHLGCDAM 240
  241 VVTSLTEIAY LLNIRGTDIP YTPVIKSYAV ISRDDIFFYV DHSKISLGID LHLRTDCFNE 300
  301 DCVKIKEYNQ IWSDIRTYAQ IWKRVLVPAP CVQDLGASEA IYTSMPGKIV VWEISPIIFM 360
  361 RAQKNSDEQA GMRRAHIRDG AAICEAMSNM ETRFHTEQWT EEKIKYEVEL WRLSQKHAKG 420
  421 LSLRTVVAYG EHSALPYYIS SNVTNIEVSD QSLLVIESGG QYLEGTTDVS RTFIFGEPTH 480
  481 EMKKAYTNVL AGILHLAQLK FPSDLKPSEV DALVRSMVWK DMTDFPQATG HGIGSFGSVE 540
  541 EPPISVSYGK NSSFHFKQGY FFSSESGYYK RDDFGVRLKN VLEVVDTGHT HPSGARFLAF 600
  601 RDVTMVPYEP KLIDSTLLSA AEKRLLNEYN AKIRNDIGDE LKRLGNMRAF YWMMNQTRHI 660
  661 REYLPEDEYR SATGAGSCGH SASPLILLGL GLMVILSAII PSRS

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle