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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: Csk-PI, Csk-PK, ...
Protein type: Transmembrane
Type Confidence: 0.75
Topology Confidence: 0.65
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNSHATATQN GQTTVVGHHR GFSQPSVTVA AAAATGSTAG DPWFLQTTGH QMPPTAPLRH  60
   61 NKRPAPQPNA VLGAGSSGTA PGSAVGAVLL HQQQLSQSQP HIVPPSIPPH HHHHRENNVH 120
  121 PIQAGAAAAL HLSSHALNSH NLISSASNHS PKSPSQTQQQ QQTTNQQQQQ QQQQASHSIL 180
  181 STFAPAPTVA AVQPAGSQSV AGTAAAVAAV AQQQQQQHLQ LLANCPPGGA GLMSSSLNAA 240
  241 QMGMHGAERA LPPKSLALSG SQHGSNMLLH TAPQPPQASQ PAAVVGVSGS GSAGMSTSLH 300
  301 SFDINGVTAG SGVNASSAWS SGSTTAMNHA SLSPTALAPQ QGRSRCEVKL NAMPWFHGSI 360
  361 TRDEAEHLLQ PREDGLFLVR ESTNFPGDYT LCVCFQSKVE HYRVKYLENK LTIDDEEYFE 420
  421 NLGQLVAHYE ADADGLCTQL IKCLPKLGKQ EFCINSKDFV DKGWVIPEAE LQLRESIGKG 480
  481 EFGDVMLGIL RNEKVAVKML KDEGAVQKFL AEASVMTTLE HDNLVKFIGL VFTSKHLYLV 540
  541 TEYMSKGSLV DYLRSRGRQH ITKKDQIIFA YDTASGMEYL EAKKVVHRDL AARNVLISED 600
  601 CVAKVSDFGL AREECYNLDV GKLPIKWTAP EALKNGRFSN KSDMWSFGIL LWEIYSFGRV 660
  661 PYPRIPLADV VKHVEVGYKM EAPEGCPPEI YEMMRQAWDL NPAKRPTFAE LKVKLQLLNN 720
  721 ATA

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