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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: CG8007-PB
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.87
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKNRFFFSFT GYFPLGSEHC LTWICLDVLF CTASIMHLCT ISVDRYLSLR YPMRFGRNKT  60
   61 RRRVTLKIVF VWLLSIAMSL PLSLMYSKNH ASVLVNGTCQ IPDPVYKLVG SIVCFYIPLG 120
  121 VMLLTYCLTV RLLARQRQNL GGGQQTAAAT PGWASGWLGQ APALERRCTW RRLLKPGPGN 180
  181 ASSVLHAHSA NSTDTDLSTL DNHELWLPDS SIKEPTPTTM TALHQFGAEM LKLSRGLESV 240
  241 ASSSTTGSPT KSEFSLSNHL QLQYPSSPQR YAATHQQSHH HNHQQHPAGV YHQQASPKGR 300
  301 HGTTVLGLST TTLGIEREST RNSLASSRMG GEQSDGTLSQ LSQRLRAYKK RRRASSAVPG 360
  361 REKRAGHEDA DEDVETPTST LRRHKRHNSL PKNALYPRHT TVQESLDDDD DEEEESAQQK 420
  421 DQQTKSKICH SDTELDPPQK AKQCHIAGQN HQSDYLQLPS VCTCPYFGDR PLQNCVKSAE 480
  481 VKIISSAFRV TTTTTAVSSS PSEMELLMCS SGNKKSLTSS VSAGITGGPA GAAPATVGST 540
  541 LSPHSAHNQG SSLTVQSDGS GYLAAPGTPC PGRRKLSISK TASVVTWDSS RHRRRGSSFG 600
  601 GVRTSLLLTP TKTATTSNSS TPLRRSATLR SHQNMNYQGA GECGGKTRTT TSSPCMLQRQ 660
  661 QTVRSHHSRN SSVISRNSSR HGRIIRLEQK ATKVLGVVFF TFVILWSPFF VLNLLPTVCA 720
  721 ECEERISHWV FDVVTWLGYA SSMVNPIFYT IFNKVFRQAF KKVLLCRYSS TSAWRPSR

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle