YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	Syx7-PB, Syx7-PA
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.91
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDLQHMENGL SGGGGGGLSE IDFQRLAQII ATSIQKVQQN VSTMQRMVNQ LNTPQDSPEL  60
   61 KKQLHQIMTY TNQLVTDTNN QINEVDKCKE RHLKIQRDRL VDEFTAALTA FQSVQRKTAD 120
  121 IEKTALRQAR GDSYNIARPP GSSRTGSSNS SASQQDNNSF FEDNFFNRKS NQQQMQTQME 180
  181 EQADLQALEE QEQVIRELEN NIVGVNEIYK KLGALVYEQG LTVDSIESQV EQTSIFVSQG 240
  241 TENLRKASSY RNKVRKKKLI LVGILSAVLL AIILILVFQF KN

Type	Start	End	Confidence
Cytoplasmic	1	258	0.96
Transmembrane Helix	259	280	0.93
Non-Cytoplasmic	281	282	0.91