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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: Nedd4-PJ
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSARSSGLVA AAALPVPSSS SSVAGGDVPR PPPRRRAASV AGQQQTRQEF GNGYTPRRSL  60
   61 AAVNDSGDSC HLRIVVLTGQ SLAKKDIFGA SDPYVRIDLN TINGDINIDS VLTKTKKKTL 120
  121 NPTWNEEFIF RVKPSEHKLV FQVFDENRLT RDDFLGMVEL TLVNLPTEQE GRTIGEQSYT 180
  181 LRPRRSVGAK SRIKGTLRIY HAFIRETREQ SEPSSGNSDG EWEHVEATNA GETSAQPHPF 240
  241 PTGGHDALPA GWEERQDANG RTYYVNHTAR TTQWDRPTVL NSHSSQSTDD QLASDFQRRF 300
  301 HISVDDTESG RSADSISHNS IEDNNNAAGL AYTPKTAATS SAPPNTPTNN NGILAQIAMQ 360
  361 YRAEEDQDPT VDHTSFVYNS LRHPVAHRQP EISATSLQND LRPVREAPGV PDIAITNPFT 420
  421 RRAAGNMAGG AGWQQERRRQ QMQLHIQQHQ QRQQQQQQNR ILLDVDHRQQ EPQHRGQRHQ 480
  481 QQHRPSNEDT DHTDSHNPSD ISAPSTRRNS EEDNAAVPPM EQNTGGEEEP LPPRWSMQVA 540
  541 PNGRTFFIDH ASRRTTWIDP RNGRASPMPN QTRRVEDDLG PLPEGWEERV HTDGRVFYID 600
  601 HNTRTTQWED PRLSNPNIAG QAVPYSRDYK QKYEYFKSHI RKPTNVPNKF EIRIRRTSIL 660
  661 EDSYRIISSV TKTDLLKTKL WVEFEGETGL DYGGLAREWF YLLSKEMFNP YYGLFEYSAM 720
  721 DNYTLQINNG SGLCNEEHLS YFKFIGRIAG MAVYHGKLLD AFFIRPFYKM MLQKPIDLKD 780
  781 MESVDTEYYN SLMWIKENDP RILELTFCLD EDVFGQKSQH ELKPGGANID VTNENKDEYI 840
  841 KLVIEWRFVA RVKEQMSSFL DGFGSIIPLN LIKIFDEHEL ELLMCGIQNI DVKDWRENTL 900
  901 YKGDYHMNHI IIQWFWRAVL SFSNEMRSRL LQFVTGTSRV PMNGFKELYG SNGPQMFTIE 960
  961 KWGTPNNFPR AHTCFNRLDL PPYEGYLQLK DKLIKAIEGS QGFAGVD

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle