YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	FBpp0304386, Syx...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.73
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSKALNNPGG NGGGGGPHRD YGAMADSTPE VSFAAAGGSS GFSPTEFMSL SEDIGHNITA  60
   61 IHSSTKQLEK QLKLIGTSKE QPNLREKVHT INTKCNARVQ TTSQDLQRLQ AVVRHGDRQQ 120
  121 KLQLEKLTRE FHGVVEKYSN LQRRISSAMR QTLQQAQQFA DQVVETNARA ELLQQQRLEQ 180
  181 AHLQQEHDML DDRRRQVEQI ESDIIDVNQI MTQLSGLVHD QGQQMDFIEN SIEQTAANVE 240
  241 DGTSELAKAA RSRQSYRRKI LILLVIAVII GLIVTGVIVA KLNS

Type	Start	End	Confidence
Cytoplasmic	1	259	0.90
Transmembrane Helix	260	280	0.97
Non-Cytoplasmic	281	284	0.73