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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: sfl-PB, sfl-PA
Protein type: Transmembrane
Type Confidence: 0.73
Topology Confidence: 0.63
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTISGGNQHN NNANRKYEKL IKQPQMQFGS SVTGTQTDVD SCRDADADAN AVRQDFSNFN  60
   61 KHFGNGHAIT DRTMLLRLED DVTTAAGIVT YKGKSNGNGN GNGNGSIGSI SLDFNGSPTS 120
  121 STSIGIASGS SSNTHLASGG GVGGIGGSEP AGWMCHCCNL IARRCFGINV RRCVLALLAI 180
  181 TMVSIFYYTH YVDTGVFNGL IQRDTHPAPI INCRMINSGG KHIRNASPAP DHRSEARLRI 240
  241 DPKVLVFVET TYSGLGRDIA ELLVYNRIKY KIEVAGKSLP VLTNLDKGRY GVIVFENLDK 300
  301 YLNMDKWNRE LLDKYCREYS VGIVGFVSPS EETLVGAQLR DFPLFVNTNL RLRDASLNPL 360
  361 SSVLRLTRAG ETAWGALPGD DWAVFQHNHS TYEPVEWAQR NTQEYPADSV GQVQLPLTTV 420
  421 LQDRGQLDGI QRVLFGSSLR FWLHRLVFLD ALSYLSHGQL SLNLERMILV DIDDIFVGEK 480
  481 GTRLRPDDVR ALIATQKNIA AMVPGFRFNL GFSGKYYHHG TREENLGDDF LLQNVQEFNW 540
  541 FSHMWKHQQP HLYDNLTLLM AEMHLNYAFA VDHNIPTDSG YSISPHHSGV YPAHELLYMA 600
  601 WKKVWNVKVT STEEYPHLRP ARLRRGFIHR NIMVLPRQTC GLFTHTMYID RYPGGRDKLD 660
  661 ESIQGGELFQ TIVYNPINIF MTHMSNYGSD RLALYTFQSV IKFLQCWTNL KLASAPPVQL 720
  721 AEMYFRLHPE EVDPVWGNPC DDVRHKKIWS KTKNCDSLPK FLVIGPQKTG TTALYTFLSM 780
  781 HGSIASNIAS PETFEEVQFF NGNNYYRGLD WYMDFFPSES LPNTSSPMPT QLGSPRFMFE 840
  841 KSATYFDGEA VPKRSHALLP HAKIVTILIS PAKRAYSWYQ HQRSHGDVIA NNYSFYQVIT 900
  901 ASDSAPRALK DLRNRCLNPG KYAQHLEHWL AYYPAQQLHI IDGEQLRLNP IDVMNELQRF 960
  961 LKIQPLLDYS NHLRYDVKKG FYCQAVSEKR NKCLGKSKGR QYPAMDERSA KLLQRYYLNH1020
 1021 NTALVKLLKK LGSRPIPQWL KDDLSTGT

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle