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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: tipE-PA, tipE-PB
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.85
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGDEQDKRTG KEKLLFYTTA FFILLGTFSL FAFLFLVPFV IEPAFTTIFM QFEEVPALCE  60
   61 TYDTEIYYGA KNCSWSSCRE GCTKDIYTCT QIRVNYRLNL YNFTDEFNFT EYHINLKEAE 120
  121 RILPPVKRTD RYERALRSDY EYDNLGGGTG LDIDLGAGRM EQLNFGDADG SNGYLIEDSE 180
  181 DTRGLSASGT LISDERRPFD EISELNEGLM GNRSMYYYVG ARLFPNVKGC GYPPMLNCTI 240
  241 WLKRYTKIGM KFPCYYSKVD PSLVISDLDY WQNTLNLVYS MAIPIPSFII SVIYLTYAYF 300
  301 KIYNEDEETA PLDKNAEDMD IDDIDAVDDS DGAVLADNVA GSQIINMDST TNDSCLEGVL 360
  361 PNGGPGMTAS ISQGGSVTTP GPYIAQSPAG SQMTPNSEIN SFGHQLKVQM ADELSRDSLE 420
  421 NGAISTSNSV QGNLSKTMTT SISTPPGPTA AV

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle