YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	CG12079-PA
Protein type:	Globular with Signal Peptide
Type Confidence:	0.95
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAALIRNLGA RAAVAALSAK HVVPAAGSTA LRMASTTPVE PKKADKPTVR QPDAVARSHL  60
   61 SDFGRYVAEC LPKYVQKVQL TAGDELEVLI APEGVVPVLQ FLKDHHQAQF TNLVDIAGVD 120
  121 VPCRKNRFEV VYNLLSLRYN SRIRVKTYTD ELTPLDSACE VHKAANWYER EIWDMYGVFF 180
  181 ANHPDLRRIL TDYGFEGHPQ RRDFPLSGYV ELRYDDEKKR VVCEPLELAQ EFRKFDLSAP 240
  241 WEQFPNFRNA NPPAEVVPPQ APAKK

Type	Start	End	Confidence
Signal Peptide	1	25	0.94
N-region	1	16
H-region	17	22
C-region	23	25
Cleavage Site	25	26
Non-Cytoplasmic	26	265	0.99