YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	Jafrac2-PA, Jafr...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSKYLSVLLL SAALVGAAKP EDNESCYSFA GGSVYPDQPK GDHQLQYTKA VISKPAPQFE  60
   61 GTAVVNKEIV KLSLSQYLGK YVVLLFYPLD FTFVCPTEII AFSDRIAEFK KIKTEVIGVS 120
  121 VDSHFTHLAW INTPRKEGGL GDVKIPLLSD LTHKISKDYG VYLESSGHAL RGLFIIDQTG 180
  181 VLRQITMNDL PVGRSVDETI RLVQAFQYTD THGEVCPAGW RPGADTIVPN PEEKTKYFAK 240
  241 NN

Type	Start	End	Confidence
Signal Peptide	1	17	0.99
N-region	1	8
H-region	9	14
C-region	15	17
Cleavage Site	17	18
Non-Cytoplasmic	18	242	0.99