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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: MAN1-PB, MAN1-PA...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.88
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSTESLNSLS DKELHRKLIQ SGFPSTPVTE TTRAVLIEKL RKHTRADKLK KRSNKYVLYS  60
   61 KEQQESPPFP QYHQYHAPQP PQNYANGLDN NNDLDQTGGS SAYNRSLDES DSSPLQLSAS 120
  121 KMYAPPPVVA SNYDGDCSPH SLGLNGKYLQ PCSMPYAIDT SNNYGKPSGK AKLSDGGVVN 180
  181 RLLSFRDTTI QRKFNYPTGQ ASRIPLRKER LTRFALSDLK SFIRNPDIRP YVIPRVLISL 240
  241 FLIFLTIITV LYVGKRFEQS PIDKAALKYT LCNPNDMQMI SEKVNCIEKD SLRGALDMSE 300
  301 ELFRHLNERA RLHHCKDANL SPALEIGEFV REMVSNPKTH RGNLHSNLMA AKYLITENPQ 360
  361 WSIQVVDSTK HLGQTSHFEL SEPNLPLKCI VLKKVTRFFT VIGALLLIVA GFLIVYVAVV 420
  421 IYRVKQKEAL LAVDQFQKDI INELIYLSSQ SESPEVVINQ LQEKFLPAKK RSKLLSSWNK 480
  481 ALKQLEKNDS RVLFGMVNRD GKAMRTIAWN RNVDKKDVGL VKKWQSPAFD NSNKIANPPT 540
  541 PCLKIRHMFD SSEVDQANLK QSIVESIIEK VGTRCKICDV QLDVQSCCVY IRCASEEDAG 600
  601 TIHKEINGWW FDKRLISIKF LRLERYLSRF PKPSAEPLYF HTNEAANTHS 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle