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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: CG5594-PC
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.48
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQSNSAKDDS DEMEIIPSEH NGTVHETKNE DSGDIHRAEE NQKSSIDPNL YLYDDDLETR  60
   61 PHISTFISSI ANYENTIPAA TDPDAKPAAP SARMGTLIGV FLPCIQNIFG VILFIRLTWV 120
  121 VGTAGAVCGF LIVLTCCCVT MLTAISMSAI ATNGVVPAGG SYFMISRSLG PEFGGAVGML 180
  181 FYTGTTLAAA MYIVGAVEIV LTYMAPWASI FGDFTKDADA MYNNFRVYGT LLLIFMGLIV 240
  241 FLGVKFVNKF ATVALACVIL SIIAVYVGIF DNIHGNEKLY MCVLGKRLLK DIPLENCTKE 300
  301 DSFLRDIYCP DGKCEEYYLA NNVTKVKGIK GLASGVFYDN IFPSFLEKGQ FISYGKSAID 360
  361 IENTSGESYN QIMADITTSF TLLIGIFFPS VTGIMAGSNR SGDLADAQKS IPIGTICAIL 420
  421 TTSTVYLSSV MFFAGTVDNL LLRDKFGQSI GGKLVVANIA WPNQWVILIG SFLSTLGAGL 480
  481 QSLTGAPRLL QAIARDEIIP FLAPFAKSSK RGEPTRALLL TIVICQCGIL LGNVDLLAPL 540
  541 LSMFFLMCYG FVNLACAVQT LLRTPNWRPR FKFYHWSLSL IGLTLCISVM IMTSWYFALI 600
  601 AMGMAIIIYK YIEYRGAEKE WGDGIRGMAL TAARYSLLRL EEGPPHTKNW RPQILVLSKL 660
  661 NDNLLPKYRK IFSFATQLKA GKGLTICVSV IKGDHTKITN KAVDAKATLR KYMTDEKVKG 720
  721 FCDVLVAQQI GEGLSSVIQT IGLGGMKPNT VIIGWPYSWR QEGRNSWKTF IQTVRTVAAC 780
  781 HMALMVPKGI NFYPESNHKI GGNIDIWWIV HDGGLLMLLP FLLKQHRTWR NCKLRIFTVA 840
  841 QIEDNSIQMK KDLKTFLYHL RIEADVEVVE MNNSDISAYT YERTLMMEQR NQMLRALGLN 900
  901 KKENSKVVQT IVDHHYDATK TASKVRFADP TIEETQHHDS QNDEKRNSID LDGPENADTP 960
  961 ETTSNKDEST EKADGDFKSS VKPDEFNVRR MHTAIKLNEV IVEKSQDAQL VIMNLPGPPR1020
 1021 EVRAERERNY MEFLEVLTEG LEKVLMVRGG GREVITIYS

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle