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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: FBpp0309765, robo-PA
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.84
Topology Confidence: 0.85
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MHPMHPENHA IARSTSTTNN PSRSRSSRMW LLPAWLLLVL VASNGLPAVR GQYQSPRIIE  60
   61 HPTDLVVKKN EPATLNCKVE GKPEPTIEWF KDGEPVSTNE KKSHRVQFKD GALFFYRTMQ 120
  121 GKKEQDGGEY WCVAKNRVGQ AVSRHASLQI AVLRDDFRVE PKDTRVAKGE TALLECGPPK 180
  181 GIPEPTLIWI KDGVPLDDLK AMSFGASSRV RIVDGGNLLI SNVEPIDEGN YKCIAQNLVG 240
  241 TRESSYAKLI VQVKPYFMKE PKDQVMLYGQ TATFHCSVGG DPPPKVLWKK EEGNIPVSRA 300
  301 RILHDEKSLE ISNITPTDEG TYVCEAHNNV GQISARASLI VHAPPNFTKR PSNKKVGLNG 360
  361 VVQLPCMASG NPPPSVFWTK EGVSTLMFPN SSHGRQHVAA DGTLQITDVR QEDEGYYVCS 420
  421 AFSVVDSSTV RVFLQVSSLD ERPPPIIQIG PANQTLPKGS VATLPCRATG NPSPRIKWFH 480
  481 DGHAVQAGNR YSIIQGSSLR VDDLQLSDSG TYTCTASGER GETSWAATLT VEKPGSTSLH 540
  541 RAADPSTYPA PPGTPKVLNV SRTSISLRWA KSQEKPGAVG PIIGYTVEYF SPDLQTGWIV 600
  601 AAQRVGDTQV TISGLTPGTS YVFLVRAENT QGISVPSGLS NTIKTIEADF DAASANDLSA 660
  661 ARTLLTGKSV ELIDASAINA SAVRLEWMLH VSADEKYVEG LRIHYKDASV PSAQYHSITV 720
  721 MDASAESFVV GNLKKYTKYE FFLTPFFETI EGQPSNSKTA LTYEDVPSAP PDNIQIGMYN 780
  781 QTAGWVRWTP PPSQHHNGNL YGYKIEVSAG NTMKVLANMT LNATTTSVLL NNLTTGAVYS 840
  841 VRLNSFTKAG DGPYSKPISL FMDPTHHVHP PRAHPSGTHD GRHEGQDLTY HNNGNIPPGD 900
  901 INPTTHKKTT DYLSGPWLMV LVCIVLLVLV ISAAISMVYF KRKHQMTKEL GHLSVVSDNE 960
  961 ITALNINSKE SLWIDHHRGW RTADTDKDSG LSESKLLSHV NSSQSNYNNS DGGTDYAEVD1020
 1021 TRNLTTFYNC RKSPDNPTPY ATTMIIGTSS SETCTKTTSI SADKDSGTHS PYSDAFAGQV1080
 1081 PAVPVVKSNY LQYPVEPINW SEFLPPPPEH PPPSSTYGYA QGSPESSRKS SKSAGSGIST1140
 1141 NQSILNASIH SSSSGGFSAW GVSPQYAVAC PPENVYSNPL SAVAGGTQNR YQITPTNQHP1200
 1201 PQLPAYFATT GPGGAVPPNH LPFATQRHAA SEYQAGLNAA RCAQSRACNS CDALATPSPM1260
 1261 QPPPPVPVPE GWYQPVHPNS HPMHPTSSNH QIYQCSSECS DHSRSSQSHK RQLQLEEHGS1320
 1321 SAKQRGGHHR RRAPVVQPCM ESENENMLAE YEQRQYTSDC CNSSREGDTC SCSEGSCLYA1380
 1381 EAGEPAPRQM TAKNT

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle