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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: NtR-PA
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.99
Topology Confidence: 0.73
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MYNLIKGSLA TYCCLCLLLI LIDPAESGQL STRFNVSFAQ LDSCETYSVP NTGYGYRRFY  60
   61 MLRELSNNNR KAGERLHLKF YVLTAMDAHI LLSVTNHPRP NDRVYEIVIG AGGNTFSAIR 120
  121 NAMGMRRVAT NQEPNLVSLY DPTPIEIVQN QNGELFVYIP GFKKEPLLQF IDEAPLVINY 180
  181 LSFSSFGSNT ARWFYDCGFD GYGSEIAPIV KEETKTEKLL SHLNIQAENA SMPANLSSIS 240
  241 FHFQTRSLAY EQTSSLLQTR MHMMMHWRDS RLVWKPEDFG SLESFEHPDL RIWKPHMNVL 300
  301 NGALQSMGQV LQSYELMVYA NGSITLYAQN LQLASWCVDS ARNWPSERVT CDIELGLNGQ 360
  361 EGQENVALIY DDQRKPIAPN EHVNTPSGWS FTQMSVVLVE NDSQRRYNPK GMMQKMTGDV 420
  421 AIEFTLQRNR SFYMTVFYLP LIACQMFLIL SFVLRSTRRS SLILIALLIA AWGLMYMTRY 480
  481 ASPHYVPPMM TAYKVIMMTT TYCYILHICI IWLDLYPPRS KAPGWLVRVI NSNVLRCILG 540
  541 LRFSDSTDYC DIQENPWHHM AKILNNLSSI LVIITFAIVD ITSGF

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle