YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: FBpp0309676, FBp...
Protein type: Globular with Signal Peptide
Type Confidence: 0.84
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPIITATTTS TAGGGAGVAA RGVATAKSPT DYLMLQQQQQ QQQQQQQHFN SNHFYQQQQP  60
   61 QQLAPLNASH QHQHSHPHPH PHPVAAATSF ATFNGNSNLN SSLANGSSRK FNCSRDNVDD 120
  121 GGDAGEMAAA SQTLSSAGTD VVGNGSGHGN GTVTGNGEKS GGLAPPGGHH LRPPPPPALK 180
  181 KSASAVIGNS ASREDVASLS GTSSLNSQMS VHNQFISGLP SNGIGSNGVH GGAATGRGGP 240
  241 PNSILKGSKE NLLQNTYYNG ETGDSSLGSE CGVGDVQHQN HESHDDPGDG LGPLPPKWET 300
  301 AYTERGELYF IDHNTGTSHW LDPRLSKYQK KSLEDCCEDE LPYGWEKIED SMYGMYFIDH 360
  361 VNRRTQYENP VLEAKRRAAE QSQQQQQMQQ QQQQMQEQRS KTPTALSETM PTEAAEAHEQ 420
  421 EEDESPMKLP YKFTRNPAEL QGQRINTTLL KSSRGLGFTI VGSDGSAGGD VEEFLQIKTV 480
  481 VPNGPAWLDG QLQTGDVLVY VNDTCVLGYT HHDMVNIFQS ILPGERAALE VCRGYPLPFD 540
  541 PNDPNTEVVT TMAVDGRESD KQRRLNMDGN YNFLDLSGEG AKKTSGSGSG FILMKKPEIY 600
  601 TFSIMKGSMG FGFTIADSAC GQIVKKILDR NCCTQLMEGD VLLEINGLNV RNKPHFYVVE 660
  661 LLKECSQTTP TAVKIQRTPP DPPANNTLAQ LNQVGNVAKL RKNFVGSGLF RSKTPTADLY 720
  721 STQVKEVLPM RPKTPLVDTR RSRVQIQSPN NEVDDEGDGA AAAERKPLQL QTQGKSNSSL 780
  781 QELDDIPYMD PYPKISRLSE RLAEVTLQGD ANGGIYGMPP SMQPLPLPLA HHESCYCYDC 840
  841 QAQRYRPGYF VQAQQAAMSG TTGQYSPLQT AHLQNERIQR RVNELLSDRR RVGFANLDPP 900
  901 QQMQHSPSWR NGALLDVSED ADQCELTEVT LERQALGFGF RIVGGTEEGS QVTVGHIVPG 960
  961 GAADQDQRIN TGDEILSIDG INVLNSSHHK VVSLVGESAL RGQVTMILRR RRTPLLQQAP1020
 1021 VSTQLRRYPY DVIVSRHENE GFGFVIISSS NHYYGSTIGK LIPGSPADRC GELKVGDRIV1080
 1081 AVNRIEIAGM SHGDVVNLIK ESGLHVRLTI GVPLKEGGPS PGGSSVGVSS NTPLQASPSL1140
 1141 LKAQLSHQQQ LPQQHLQQAQ LNHHHQHLEM PMSMPVPGHG SYLERPSNNI SATLALHQQP1200
 1201 QL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle