YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	FBpp0311551, l(2...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.73
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Predicted Protein Segments [Hide List]:

Type	Start	End	Confidence
Cytoplasmic	1	19	0.88
Transmembrane Helix	20	41	0.86
Non-Cytoplasmic	42	92	0.81
Transmembrane Helix	93	112	0.73
Cytoplasmic	113	119	0.77
Transmembrane Helix	120	139	0.90
Non-Cytoplasmic	140	146	0.56
Transmembrane Helix	147	169	0.79
Cytoplasmic	170	180	0.84
Transmembrane Helix	181	203	0.90
Non-Cytoplasmic	204	210	0.81
Transmembrane Helix	211	230	0.97
Cytoplasmic	231	271	0.95
Transmembrane Helix	272	295	0.86
Non-Cytoplasmic	296	314	0.92
Transmembrane Helix	315	335	0.92
Cytoplasmic	336	352	0.88
Transmembrane Helix	353	372	0.91
Non-Cytoplasmic	373	378	0.76
Transmembrane Helix	379	398	0.92
Cytoplasmic	399	409	0.76
Transmembrane Helix	410	433	0.85
Non-Cytoplasmic	434	446	0.75
Transmembrane Helix	447	467	0.93
Cytoplasmic	468	497	0.93

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTTALTMVKT GGKYANEKFF GVRHVQCILC FFCLAMSYAW RVNLSVALVA MTDNSTSLAQ  60
   61 NNTNTGVAPS EPGFDFFNSE RYYNFTQKEK GNLQASFFFG YIVTQVPGGY IAQRYGAKTM 120
  121 LMYGLGIAAL ITMLSPMSLQ FGWVALAVMR FVMGLAQGAV HPATHALLAK WSPADERGML 180
  181 GTLCYSGAQF GTVVMLATSG FIADSVLGWP SIFYLGGACG FIWMVFWYLF SASTPEEHRL 240
  241 ISPGELKYIT DSRSDGKMQS AEKLAPTPWK AIFSSLPFLS LLVVHCTHIF GYWLLLMQIP 300
  301 TYMKKIYHVD IKKGALLSSL PYMVMLLLSF FFVWLSKVLQ KKEGMSLSFN RKIFNSIGHW 360
  361 IPMLSLIALG YVPADNAPLA VTLLTLTVGI SGATYLGFQV NHIDLSPNYA GTLMGITNCA 420
  421 ANVMSGIAPV IVGQIVVDET SVTEWRLVFL LAAAFYFLGN LLFVIFGRTE VQWWDSPRDN 480
  481 KEDAEQGTPL APNGQVK