YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	mbl-PB
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.54
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MANVVNMNSL LNGKDSRWLQ LEVCREFQRN KCSRQDTECK FAHPPANVEV QNGKVTACYD  60
   61 SIKGRCNRDK PPCKYFHPPQ HLKDQLLING RNHLALKNAL MQQMGIAPGQ PVISGQVPAV 120
  121 ATNPYLTGIP ANSYSPYYTT GHLVPALLGP DPVTSQLGPV VPQTVQVAQQ KIPRSDRLET 180
  181 SPLAAHHHQQ QQQLQHQLNN INNNNNHSTA GAAATSTTAT TTTNNAAAAA AAAAAAAAAA 240
  241 VMGHHTLEVG KKRAADTTDM FPLVFFCSFP SPCVFAFLNC SIFGFLRLWF SLFNLRH

Type	Start	End	Confidence
Non-Cytoplasmic	1	225	0.60
Transmembrane Helix	226	247	0.80
Cytoplasmic	248	262	0.54
Transmembrane Helix	263	286	0.87
Non-Cytoplasmic	287	297	0.54