YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	Cyp6a8-PA
Protein type:	Transmembrane
Type Confidence:	0.76
Topology Confidence:	0.37
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MALTYILFQV AVALLAILTY YIHRKLTYFK RRGIPFVAPH LIRGNMEELQ KTKNIHEIFQ  60
   61 DHYNKFRESK APFVGFFFFQ SPAAFVIDLE LAKQILIKDF SNFSNKGIFY NEKDDPISAH 120
  121 LFNLDGAQWR LLRNKLSSTF TSGKMKLMYP TVVSVANEFM TVMHEKVPKN SVLEIRDLVA 180
  181 RFTVDVIGTC AFGIQCNSLR DEKAEFLYFG KRSLVDKRHG TLLNGFMRSY PKLARKLGMV 240
  241 RTAPHIQEFY SRIVTETVAV REKEHIKRND FMDMLIELKN QKEMTLENGD VVRGLTMEEV 300
  301 LAQAFVFFIA GFETSSSTMG FALYELAKNP DIQDKVRAEV EEVIEQHDQN FTYECTKDLK 360
  361 YLNQVLDETL RLYTIVPNLD RMAAKRYVVP GHPNFVIEAG QSVIIPSSAI HHDPSIYPEP 420
  421 FEFRPERFSP EESAGRPSVA WLPFGDGPRN CIGLRFGQMQ ARIGLALLIR NFKFSTCSKT 480
  481 PNPLVYDPKS FVLGVKDGIY LKVETV

Type	Start	End	Confidence
Non-Cytoplasmic	1	4	0.67
Transmembrane Helix	5	23	0.72
Cytoplasmic	24	72	0.61
Transmembrane Helix	73	87	0.37
Non-Cytoplasmic	88	506	0.80