YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: Spt-I-PC, Spt-I-...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.43
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVAIQLFNEI GSIFRNTPTF ALVLETLLLI TVIWLLLHRR GGGRRRQLTK EEEDRIIADY  60
   61 EPEPLVADTD PNHPLLHTRV VQSRVGKRIQ VDGHDCLNLG SHNYLGFLED QEILEEACKS 120
  121 LRKYGVGSCG PRGFYGTMDV HLDLEDRIAK FMGLEEAIVY SYGFSTVASA IPAYAKRGDL 180
  181 IFVDEAVNFA IQKGLDASRS TIVFFKHNDV EDLERLLIEQ EKRDQKNPKK AAKTRRFLVA 240
  241 EGIYMNTGEI CPLPDLVALR QKYKLRLFID ESISFGTLGQ GGHGVTEHFN VDRDEVDLIS 300
  301 AGMEGSMATV GGFCVGSHFI AEHQRLSGLG YIFSASLPPM LTQAAISALD RFEREPQIFE 360
  361 QLQAKSKTLH QKFLRFSKLT LRGDEVSPVK HLYLAQPAEN FDKELKLLTE LADKCIARGV 420
  421 AVVQAAYLQN RERQPVRPSI RIAVNRLLES SEIDNAFEVI ESVSSSVL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle