YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	CG33671-PA, FBpp...
Protein type:	Transmembrane
Type Confidence:	0.81
Topology Confidence:	0.46
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLKFQVHSPG KVILHGEHAV VYHRPALAAV VGLGTTLRFR QLEDSQVASF QLEALNCTLE  60
   61 IQLPEFNGFL AEFRSKYPSD STANLLEAVR AEVSKQLERS GGNAPKQHTQ RAFISIYYLL 120
  121 AGAVLSAPGD KKLTLQTGFQ VQVDSQLTVG AGLGSSASFG AALATTFLIL AGHFDRDSYL 180
  181 SEANQALISS WAYESERVNH GTPSGLDNTV CTYGGMLRYV KGQGFQSLKI QKPLNILLVD 240
  241 SRVSRSTADI VAKVRHLGDA FPQLIEAIWQ ACEELVAAAV PLYESFGNAQ DDSSKFEQLE 300
  301 RLFQINNDLL KAIGVSHPKL EQIFTIAFKR GFFSKLTGAG AGGYVIVLLP ENYECNEVYW 360
  361 KLKEELESAG FGVHVTTAGG EGLRVSSLDD

Type	Start	End	Confidence
Cytoplasmic	1	112	0.54
Transmembrane Helix	113	129	0.46
Non-Cytoplasmic	130	148	0.81
Transmembrane Helix	149	171	0.63
Cytoplasmic	172	390	0.54