YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	Syx6-PD
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.69
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSLEDPFFVV KDEVFKALNK TRGLYLRWRE LGENGGTEAE WTTTELRNSL RSIEWDLEDL  60
   61 EDTISIVEKN PSKFRIDNRE LSSRRHFIDN TRDEVKQMKD KMSLNRSRDR DITAHQPLLD 120
  121 NDRHSPNHNH SIAIPNSNSN SNEYHQHPHN DRTYLVECPN GNSLINSGSQ VANTIAGTMS 180
  181 AAAAAASRHS GTKYSKLENA LDSPSHYGQT HHGGMDSPSH RYVGETVSIQ QRMIQGQDEQ 240
  241 LDMISDSIGT LKTVSRQIGV ELDEQAVMLD DFGNEFDTTE SKLDTTMKKV AKVLHMNNDK 300
  301 RQWAAILILS GLLLFVIILF IIL

Type	Start	End	Confidence
Cytoplasmic	1	302	0.69
Transmembrane Helix	303	322	0.97
Non-Cytoplasmic	323	323	0.72