YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: CPTI-PA, CPTI-PB
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.85
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAEAHAAVAF SFAITHEGFD INYDHEVLNL VWNSGVRSWK KRLARARNGV RNGVYPAHIQ  60
   61 SLWLISAIAL GLHFAGYQAP FNLTNRILVH LPSNTINWQV TACFLAALVV WLSICFTMRY 120
  121 TLKLLLMYKG WMYESRAPGS RVSLPTMLWV AVVRVLSSWN KPGLYSFQGS LPRLPLPSVK 180
  181 DTMTRYLRSV RPLLDDENYT RMERLAKEFE QTIGKKLQWY LILKSWWSTN YVSDWWEEYV 240
  241 YLRGRSPLCV NSNFYGTDAI FMNLTDKQAA RAANVISLLL NFRRLIEHQE LQPIMVQGMI 300
  301 PLCSWQYERT FNTARVPGLE TDRIIHYRDS NHIVVLHKGC YYKMLIYYKG RILRPCELQV 360
  361 QIEEILKGKA TPVEGEEHLA ALTAWNRSKW AEARNTFFSW GVNQTSLRTI ESAAFVLSLD 420
  421 DEPFEFDLAR PELLDNFGKK LLHGNGYNRW FDKCFTVCVG TNGRVGFNAE HTWADAPVLG 480
  481 HLWEYIFGDD IYGYDETGNT KGTPAFQPPT PTRLTWDLKP CLAQIEEATI DVTKLINEVN 540
  541 LRILVHQDYG KGFMKKCRIS PDAYIQMALQ LAYYRDAGRF SLTYEASMTR LFREGRTETV 600
  601 RPCTIESSAW VKAMQNPNTT NDERVKMMQA ACDRHQLGYQ DAMCGRGIDR HLFCLYVVSK 660
  661 YLEVDSPFLN EVLSEPWRLS TSQTPHGQTP KMDLKKHPNC ISAGGGFGPV ADDGYGVSYI 720
  721 IAGENLIFFH ISAKTTCQQT DVHRFAQNIS QALSDIRSMF EQHMKDHPKP AKSLTNGKST 780
  781 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle